email+to+Hojoon+about+online+program+that+can+do+shotgun+type+alignment+7-30-13

Hey Hojoon, do you know of an online tool that can align "shotgun" like data? Bl2seq can align the type of data indicated in the "Data 2" box diagram in the attached pdf, but Bl2seq cannot align the type of data in the "Data 1" box diagram in the attached pdf. Do you know of an online tool that can handle "Data 1" type data? Best,

Kurt

attachment "F:\kurt\storage\CIM Research Folder\DR\2013\7-30-13\alignment data example 7-30-13.pdf"

Note that Krupa thought the term "DNA stitching" might be helpful

see example of shotgun like sequence alignment data 7-30-13