Mouse+Transcripts

Mouse RNA transcripts (the mouse refseq rna database) can be downloaded.

Information here http://www.ncbi.nlm.nih.gov/books/NBK50679/#RefSeqFAQ.what_data_are_available_for_ft Download location here ftp://ftp.ncbi.nlm.nih.gov/refseq/M_musculus/mRNA_Prot/ Personally downloaded file here "C:\kurt\storage\CIM Research Folder\DR\2013\2-26-13\mouse_transcripts\mouse.rna.fna"

Spreadsheets of this data here "C:\kurt\storage\CIM Research Folder\DR\2013\2-26-13\mouse_transcripts\mouse_transcripts_spreadsheet.xlsx" and "C:\kurt\storage\CIM Research Folder\DR\2013\2-26-13\mouse_transcripts\mouse_transcripts_spreadsheet_sorted.xlsx"

Summary of Mouse RefSeq RNA (RNA molecule length distribution) "C:\kurt\storage\CIM Research Folder\DR\2013\2-26-13\mouse_transcripts\Summary of Mouse RefSeq RNA 2-26-13.docx" -Some information from docuement Smallest mouse RNA (28 bp): Mus musculus small nucleolar RNA, C/D box 98 (Snord98), small nucleolar RNA Largest mouse RNA (32759 bp): Mus musculus KCNQ1 overlapping transcript 1 (Kcnq1ot1), non-coding RNA Average RNA Length (average transcript size): 2653 bp Median RNA Length (median transcript size): 2126 bp 93.1 % of all RNAs are less than 6,000 bp

see RNA Transcriptome