Short+communication+paper+associated+with+DNA+Vaccine+Conference+2-14-13

Short communication paper associated with DNA Vaccine Conference 2-14-13 aka 3p library for (3 prime library paper) aka 3p library paper aka 3p_library

some of the original email threads regarding paper -https://mail.google.com/mail/u/0/?ui=2&shva=1#label/Career/13c85c75a02a5870 -https://mail.google.com/mail/u/0/?ui=2&shva=1#label/Career/13c66d8c89e18e47

Potential title for paper (newest to oldest) A microarray method for identifying tumor antigens by screening a tumor cDNA expression library against cancer sera A microarray method for identifying tumor immunogens by screening lysates from a tumor cDNA library against cancer sera Screening pooled tumor cDNA library lysate for immunogens

Running title Screening pooled tumor cDNA library lysate for antigens

Location of my work on paper C:\kurt\storage\CIM Research Folder\kwhittem\Papers\My Possible Papers\3p_library

authors Kurt Whittemore and Kathryn Sykes

acknowledgements John Lainson, Maran Montgomery, Luhui Shen, Phillip Stafford

Journal for this paper Human Vaccines and Immunotherapeutics

Guidelines for authors found here http://www.landesbioscience.com/journals/vaccines/guidelines/ some notes on guidlines for authors 2-15-13

some initial information can be found here [|https://mail.google.com/mail/u/0/?ui=2&shva=1#label/Career/13c66d8c89e18e47]

Submission link http://hv.msubmit.net/cgi-bin/main.plex?el=A7Ca3BzV7A2Dhv1J3A9H1Djz0D5odbS73dfprXuQQZ e-mail here https://mail.google.com/mail/u/0/?ui=2&shva=1#search/ronald/13d5ae74fa6d68f3

link to check manuscript #|status here http://hv.msubmit.net/cgi-bin/main.plex?el=A5Ca4gb4A7Dhv5F2A9hYFASWq49GBw3M3gKp9TwZ

Note that as I was assembling the rough draft for this paper, I was also gathering information for the corresponding part of my dissertation. see Information for 3 prime cDNA library started 2-15-13

Potential keywords for paper need at least 7 keywords cancer, tumor, vaccine, immunogen, cDNA, library, sera, antibody -original older list --cancer, tumor, vaccine, immunogen, cDNA, library, sera, antibody, pools, lysate, clones, protein here's a word cloud generated from wordle.net "C:\kurt\storage\CIM Research Folder\DR\2013\3-19-13\work on paper\word_cloud_of_3p_library_paper.png"

peer reviewer Kathy wanted to choose a peer reviewer from this paper Phage display: Concept, innovations, applications and future http://www.sciencedirect.com/science/article/pii/S0734975010000972# She liked Elena Pasquale Elena Pasquale elenap@sanfordburnham.org Sanford Burnham Medical #|Research Institute She thought some Texas A&M people could be good. She thought I should not choose people in the field too long such as Andy White

Author Information (first and last name, postal #|address, work telephone number, e-mail address)

a rough draft outline of the paper found here "C:\kurt\storage\CIM Research Folder\kwhittem\Papers\My Possible Papers\3p_library\paper\3p_library_rough_draft_2-15-13.docx"

Current version of paper (newest to oldest) S:\Research\Cancer_Eradication\Users\kwhittem\DR\2013\7-18-13\smc_paper\edited document\2013HV0047R.docx and "F:\kurt\storage\CIM Research Folder\DR\2013\7-18-13\smc paper\edited document\2013HV0047R.docx"

"F:\kurt\storage\CIM Research Folder\kwhittem\Papers\My Possible Papers\3p_library\paper\A microarray method for identifying tumor antigens by screening a tumor cDNA expression library against cancer sera.docx" ^ renamed from !^ "F:\kurt\storage\CIM Research Folder\kwhittem\Papers\My Possible Papers\3p_library\paper\Kathy feedback 6-17-13\Kurt modifications 6-17-13\3p_library_rough_draft_6-17-13.docx"

Older versions of paper found in this folder C:\kurt\storage\CIM Research Folder\kwhittem\Papers\My Possible Papers\3p_library\paper

I would like to make a figure about selection of lysates from tumor lysate screens 3-8-13 Slide Image Figure 3-10-13 SMC1fs PC detection figure 3-10-13 RT-PCR of transcripts figure 3-10-13 Table of Transcript Info 3-10-13 Table of categories of features for lysate screen figure 3-28-13 list of pdfs to assemble final pdf of figures Figure 1 "F:\kurt\storage\CIM Research Folder\DR\2013\3-10-13\work on paper\slide image figure\Figure 1a.pdf" "F:\kurt\storage\CIM Research Folder\DR\2013\3-10-13\work on paper\slide image figure\Figure 1b.pdf" Figure 2 F:\kurt\storage\CIM Research Folder\DR\2013\3-10-13\work on paper\SMC1fs PC figure\Figure 2.pdf Figure 3 F:\kurt\storage\CIM Research Folder\DR\2013\3-9-13\work on paper\figure for selecting lysate from 3e6 clone\Figure 3a.pdf F:\kurt\storage\CIM Research Folder\DR\2013\3-10-13\work on paper\validation from 3e6 screen\Figure 3b.pdf F:\kurt\storage\CIM Research Folder\DR\2013\3-10-13\work on paper\3000 screen\Figure 3c.pdf F:\kurt\storage\CIM Research Folder\DR\2013\3-10-13\work on paper\single clone lysates\Figure 3d.pdf

command to combine all pdfs with pdftk 6-10-13

pdf of All figures found here "F:\kurt\storage\CIM Research Folder\DR\2013\3-14-13\All Figures.pdf" ^ renamed from below "F:\kurt\storage\CIM Research Folder\DR\2013\3-14-13\All Figures 6-17-13 Kurt Whittemore.pdf" "F:\kurt\storage\CIM Research Folder\DR\2013\3-14-13\All Figures 6-10-13 Kurt Whittemore.pdf" "F:\kurt\storage\CIM Research Folder\DR\2013\3-14-13\All Figures old 2.pdf" "F:\kurt\storage\CIM Research Folder\DR\2013\3-14-13\All Figures old 1.pdf"

Table "F:\kurt\storage\CIM Research Folder\DR\2013\3-28-13\table for figure 3\Table 1.docx" "F:\kurt\storage\CIM Research Folder\DR\2013\3-10-13\work on paper\Table of transcript info\Table 2.docx"

Message I'd like to send to kathy 3-12-13 Work on paper 3-14-13

Feedback from Kathy 3-27-13

post submission revisions round 1 First proof 7-18-13 Galley proof 8-2-13 - "F:\kurt\storage\CIM Research Folder\DR\2013\8-2-13\Galley proof 8-2-13.txt" Receipt of payment -"F:\kurt\storage\CIM Research Folder\DR\2013\8-9-13\Inv_LB0071548_from_Landes_Bioscience_3016.pdf"

A microarray method for identifying tumor immunogens by screening lysates from a tumor cDNA library against cancer sera