Meme+suite

MEME suite The MEME Suite allows you to: discover motifs using MEME, DREME (DNA only) or GLAM2 on groups of related DNA or protein sequences, search sequence databases with motifs using MAST, FIMO, MCAST or GLAM2SCAN, compare a motif to all motifs in a database of motifs, associate motifs with Gene Ontology terms via their putative target genes, and analyse motif enrichment using SpaMo or CentriMo.

[] australian version of website (sometimes one set of servers will not work with certain databases or have some other problems) http://meme.ebi.edu.au/

papers

MEME c discovering and analyzing DNA and protein sequence motifs paper

MEME SUITE c tools for motif discovery and searching paper

test of MAST 4-24-13