Application+of+Sera+Onto+Array+2-23-12

1st experiment 2-23-12 2nd potential experiment 3-7-12 Titration of Secondary Antibody 4-19-12 Reanalysis of array data 4-30-12 3 Main Samples with lower secondary 5-1-12 Absorption of e coli antibodies 5-17-12 3 Main Samples with 1 nM secondary 5-25-12 Absorption of e coli antibodies 5-29-12 Titration of Secondary 6-1-12 Validation of most significant spots 6-1-12 Validation of antibody purification 6-19-12 Tumor vs normal on 2-17-12_16E3 spot Tumor vs normal on 8 selected lysates 7-24-12 Tumor vs normal on 2-17-12_16E3 spot 2 Tumor vs normal on Single Clones 8-27-12 Tumor vs normal on Single Clones 9-12-12 Tumor vs normal on Single Clones 9-21-12 Tumor vs normal on Single Clones 10-11-12

Note that I would like to be able to analyze data from these experiments in a more quick and automated fashion so I will write a little bit of code to do this so I don't have to keep repeating the same actions in Excel. Java Programs to Analyze Array Data

Features I would like to look at in array data
 * fold changes
 * p values
 * q values (false discovery rates)